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Genetic study Urbanization and genetic homogenization in the medieval Low Countries revealed through a ten-century paleogenomic study of the city of Sint-Truiden

Tautalus

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Y-DNA haplogroup
I2-M223 / I-FTB15368
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H6a1b2y
The paper analyzed whole‐genome data from hundreds of individuals spanning the 8th to the 18th century from Sint-Truiden (northern Belgium). The researchers modeled the genetic ancestry using two primary sources. One proxy was Late Iron Age (LIA) French genomes representing “Gaulish” ancestry, and the other was Early Medieval (EMA) genomes from the Netherlands representing “Germanic” ancestry. Using qpAdm, they found that, on average, the Sint-Truiden individuals derived about 63% of their genome from Gaulish ancestry and 37% from Germanic ancestry, a composition that remained largely stable from the Early Middle Ages onward.
During the Early and High Medieval periods, the population exhibited greater individual variability in ancestry proportions. Over time, as long-distance migration diminished and local admixture continued, the population became genetically homogenized.
The admixture between the Gaulish and the Germanic ancestries established a genetic cline that is observable in the Low Countries (Belgium, Netherlands, Luxembourg) today.

Abstract
Background

Processes shaping the formation of the present-day population structure in highly urbanized Northern Europe are still poorly understood. Gaps remain in our understanding of when and how currently observable regional differences emerged and what impact city growth, migration, and disease pandemics during and after the Middle Ages had on these processes.
Results
We perform low-coverage sequencing of the genomes of 338 individuals spanning the eighth to the eighteenth centuries in the city of Sint-Truiden in Flanders, in the northern part of Belgium. The early/high medieval Sint-Truiden population was more heterogeneous, having received migrants from Scotland or Ireland, and displayed less genetic relatedness than observed today between individuals in present-day Flanders. We find differences in gene variants associated with high vitamin D blood levels between individuals with Gaulish or Germanic ancestry. Although we find evidence of a Yersinia pestis infection in 5 of the 58 late medieval burials, we were unable to detect a major population-scale impact of the second plague pandemic on genetic diversity or on the elevated differentiation of immunity genes.
Conclusions
This study reveals that the genetic homogenization process in a medieval city population in the Low Countries was protracted for centuries. Over time, the Sint-Truiden population became more similar to the current population of the surrounding Limburg province, likely as a result of reduced long-distance migration after the high medieval period, and the continuous process of local admixture of Germanic and Gaulish ancestries which formed the genetic cline observable today in the Low Countries.

PCA of selected modern (B) and ancient (C) genomes

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qpAdm based Gaulish (blue) and Germanic (orange) ancestry estimates in Flemish and Dutch provinces.

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Y chromosome haplogroup frequencies

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The genetic admixture of Germanic and Gaulish is also reflected in the distribution of haplogroups, with U106 and P312 both being common and with the three major subclades of P312 (U152, S461 (L21) and DF27) all being represented.
 
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A major study on Belgian DNA from the 8th to the 18th century has just been published by Leuven University. The study reveals how mediaeval individuals still had clearly distinct Gaulish and Germanic DNA, but that the two groups eventually emerged over time.

Urbanization and genetic homogenization in the medieval Low Countries revealed through a ten-century paleogenomic study of the city of Sint-Truiden

Some mediaeval samples from Flanders were similar to those from modern Ireland or late Iron Age France.

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This chart shows the percentage of Germanic ancestry (orange) and Celtic/Gaulish ancestry (blue) in Flanders and the Netherlands. I wish they had also included Wallonia and divided Gallo-Roman ancestry into Gaulish and Roman.

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We find differences in gene variants associated with high vitamin D blood levels between individuals with Gaulish or Germanic ancestry.

Haven't read everything, does anyone know how exactly those differences being defined?
 
Haven't read everything, does anyone know how exactly those differences being defined?

Here is what the article says:

"We found that individuals carrying at least one of the five red hair causing alleles in the MCR1 gene had higher proportion of Germanic ancestry, while individuals carrying the rs7944926-G allele in the DHCR7 gene, which is associated with higher levels of vitamin D precursor 25(OH)D3 (calcidiol) in the blood, had higher proportion of Gaulish ancestry."
 
Very interesting. The auDNA making isn't too precise but if we rely on it, we may think the Germanics input in Flanders is stayed light enough. I see nevertheless differences between West Vlanderen and Belgium Limburg. At Early Middle Ages we see a noticeable input of their 'germanics' component before it has been levelled by time through osmosis. In B. Limburg this input has never been so strong. A pre-Germanic kernel?
That said, at the ethnic level, the Germanic speaking input has been surely stronger than their auDNA components show us. The reason for me is that the Franks confederation had already acculturated Gaulish Celts and Belgae descendants (these last ones, whatever their languages, being autosomally closer to the Celts) what is seen on the osteologic remains of the Franks. I suppose even the south of Netherlands pop's were "Celtic" enough at first, before supplementary inputs of purer Germanic tribes (Saxons, Frisians). Some old scholars (based on typology it's true) said the pop of Zeeland until relatively recent times showed a difference between western shores (more Germanic- or "Viking"-like) and the eastern parts turned towards mainland.
 
I have merged the two threads.
 
I await with excitement the specific haplogroups if anyone can retrieve them somehow.
 
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