qpadm

Download here I created an HTML/Javascript-based tool with ChatGPT for easier qpAdm/qpWave R script production to help streamline downstream analysis. It lets users load an IND or FAM file, browse and search populations and samples, drag and drop populations into Target, Source, and...

the proportions of the models changed because the Anatolian source for used for Balkaners was changed from Turkey_Southeast_Byzantine.DG to Italy_Imperial_oEast.SG, representing the admixture profile of Roman era west Anatolians which migrated to the Balkans. It was mainly a mixture of...

I tried to run Greeks on qpAdm,and these are my results.Feel free to correct my right pops or any mistake you detect. Cretan run: Pontic Greek run: South and North Mainland runs:

Its similar to a model Eupator has suggested before for Greek_1.DG iirc. The outrights are similar to the one used in the study "Ancient DNA reveals the origins of the Albanians"

Hello guys.I have recently started experimenting with the ADGAP website,which makes the computing process of running a qpadm a lot easier.Although,i cant find anything in internet about converting my raw dna file from myheritage to the format of the samples from the AADR data.Can anyone help?

The outgroups and left groups work for all Italians and create a cline between Italy_BA.SG and Greece_Crete_HgCharalambos_EMBA.AG. Although this model is mostly historically plausible only for southern regions (particularly Apulia), I think it hints at something broader. library(admixtools)...

Since I’ve perfected my iron age UK model, I think it would be nice to share the results that some UK groups get on it. Denmark_IA.SG represents DNA from Germanic speakers, Scotland_IA.AG represents DNA from insular Celts, And Czechia_IA_Hallstatt.SG represents DNA from continental Celts...

I used ChatGPT’s Deep Research (o3 mini-high) and Grok 3 Think to analyze Harney et al. (2019)'s PDF supplement as well as the GitHub ADMIXTOOLS2 tutorial to determine best practices for analyzing my modern WGS30x sample alongside AADR 62.0 1240K aDNA data. Over the past few days, I’ve been...

Do academic models rule out other influences? For example, If the Slavs are modeled through CWC in studies, does this mean that they do not have a component of the Srubnaya, or Sintashta culture (Steppe_MLBA), or have very little (1-3%) because academic tools do not confuse the components?

The percentage of Germans flows in different models Target: Sipovka_scaledMH Distance: 2.0588% / 0.02058755 40.6 Russia_Sunghir_Medieval.SG 25.6 Lithuania_Marvele_Roman.SG 20.4 RUS_Sintashta_MLBA 13.4 Netherlands_Groningen_Saxon_Medieval Target: Sipovka_scaledMH Distance: 2.3858% /...

I used ChatGPT to help craft a script that streamlines testing multiple samples to see how well they fit within an existing population model. This approach makes it easier to organize and assess whether a particular sample or group of samples works in combination with another set you're...

Statistically robust: Failed: FAM and Script: https://www.eupedia.com/forum/threads/academic-qpadm-model-replication.44506/post-678759

Eight samples that were modeled to have statistical robustness: Four samples that with inadequate p-values:

With a big thanks to Maciamo for creating it, we are proud to announce the creation of the Admixtools sub-forum! This thread will be dedicated to the re-creation of qpadm models from academic papers. The object of the thread is to post FAM or Ind files that are modified to replicate a select...