Antonio M. et al 2019 - Iron Age Samples Raw Data

Jovialis

Jovialis

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Ethnic group
Italian
Y-DNA haplogroup
R-PF7566 (R-Y227216)
mtDNA haplogroup
H6a1b7
Last edited:
Thank you for hard work.
 
Jovialis said:
Here are the Iron Age samples from Ancient Rome: A genetic crossroads of Europe and the Mediterranean

I used WGS extract to "convert" the files from BAM to usable raw data, in WGS combined, as well as AncestryDNA format.

http://www.mediafire.com/file/hzqdryr37t7s0cm/Antonio_M._et_al_2019_-_Iron_Age_Samples.zip/file


These files do not work on Gedmatch, they get status Percent HTZ out of range

But they do work on Admixture Studio.

Enjoy!
Click to expand...

the R1 files do work on GedMatch :)
I haven’t tested the others.
 
I read, this HTZ function was to prevent uploading artificial genomes to Gedmatch. But they killed Ancient samples too...
 
Jovialis said:
Nice! good to know, R850, and R437 were getting the HTZ out of range error.
Click to expand...

R1 works......just tried it ...see below

[h=2]Jtest Oracle results:[/h]Jtest Oracle population reference data revised 06 Nov 2012.

Kit AG4512653

Admix Results (sorted):

Population

[TD="align: center"] # [/TD]

[TD="align: right"] Percent [/TD]

[TD="width: 30, align: center"]1[/TD]
[TD="width: 120"]WEST_MED[/TD]
[TD="width: 50, align: right"]19.01[/TD]

[TD="width: 30, align: center"]2[/TD]
[TD="width: 120"]ATLANTIC[/TD]
[TD="width: 50, align: right"]18.22[/TD]

[TD="width: 30, align: center"]3[/TD]
[TD="width: 120"]EAST_MED[/TD]
[TD="width: 50, align: right"]16.57[/TD]

[TD="width: 30, align: center"]4[/TD]
[TD="width: 120"]NORTH-CENTRAL_EURO[/TD]
[TD="width: 50, align: right"]14.74[/TD]

[TD="width: 30, align: center"]5[/TD]
[TD="width: 120"]SOUTH_BALTIC[/TD]
[TD="width: 50, align: right"]7.61[/TD]

[TD="width: 30, align: center"]6[/TD]
[TD="width: 120"]ASHKENAZI[/TD]
[TD="width: 50, align: right"]6.96[/TD]

[TD="width: 30, align: center"]7[/TD]
[TD="width: 120"]WEST_ASIAN[/TD]
[TD="width: 50, align: right"]6.83[/TD]

[TD="width: 30, align: center"]8[/TD]
[TD="width: 120"]EAST_EURO[/TD]
[TD="width: 50, align: right"]6.82[/TD]

[TD="width: 30, align: center"]9[/TD]
[TD="width: 120"]MIDDLE_EASTERN[/TD]
[TD="width: 50, align: right"]2.49[/TD]

[TD="width: 30, align: center"]10[/TD]
[TD="width: 120"]SIBERIAN[/TD]
[TD="width: 50, align: right"]0.65[/TD]

[TD="width: 30, align: center"]11[/TD]
[TD="width: 120"]WEST_AFRICAN[/TD]
[TD="width: 50, align: right"]0.1[/TD]

Single Population Sharing:

Population (source)

[TD="align: center"] # [/TD]

[TD="align: right"] Distance [/TD]

[TD="width: 40, align: center"]1[/TD]
[TD="width: 220"]North_Italian[/TD]
[TD="width: 50, align: right"]4.85[/TD]

[TD="width: 40, align: center"]2[/TD]
[TD="width: 220"]Tuscan[/TD]
[TD="width: 50, align: right"]7.02[/TD]

[TD="width: 40, align: center"]3[/TD]
[TD="width: 220"]PT[/TD]
[TD="width: 50, align: right"]10.47[/TD]

[TD="width: 40, align: center"]4[/TD]
[TD="width: 220"]ES[/TD]
[TD="width: 50, align: right"]11.93[/TD]

[TD="width: 40, align: center"]5[/TD]
[TD="width: 220"]RO[/TD]
[TD="width: 50, align: right"]12.34[/TD]

[TD="width: 40, align: center"]6[/TD]
[TD="width: 220"]FR[/TD]
[TD="width: 50, align: right"]13.05[/TD]

[TD="width: 40, align: center"]7[/TD]
[TD="width: 220"]Serbian[/TD]
[TD="width: 50, align: right"]13.4[/TD]

[TD="width: 40, align: center"]8[/TD]
[TD="width: 220"]AT[/TD]
[TD="width: 50, align: right"]15.51[/TD]

[TD="width: 40, align: center"]9[/TD]
[TD="width: 220"]South_Italian_&_Sicilian[/TD]
[TD="width: 50, align: right"]15.79[/TD]

[TD="width: 40, align: center"]10[/TD]
[TD="width: 220"]HU[/TD]
[TD="width: 50, align: right"]17.48[/TD]

[TD="width: 40, align: center"]11[/TD]
[TD="width: 220"]GR[/TD]
[TD="width: 50, align: right"]17.72[/TD]

[TD="width: 40, align: center"]12[/TD]
[TD="width: 220"]West_&_Central_German[/TD]
[TD="width: 50, align: right"]19.23[/TD]

[TD="width: 40, align: center"]13[/TD]
[TD="width: 220"]NL[/TD]
[TD="width: 50, align: right"]20.17[/TD]

[TD="width: 40, align: center"]14[/TD]
[TD="width: 220"]Cornish[/TD]
[TD="width: 50, align: right"]20.55[/TD]

[TD="width: 40, align: center"]15[/TD]
[TD="width: 220"]English[/TD]
[TD="width: 50, align: right"]21.29[/TD]

[TD="width: 40, align: center"]16[/TD]
[TD="width: 220"]Orcadian[/TD]
[TD="width: 50, align: right"]22.93[/TD]

[TD="width: 40, align: center"]17[/TD]
[TD="width: 220"]IE[/TD]
[TD="width: 50, align: right"]23.07[/TD]

[TD="width: 40, align: center"]18[/TD]
[TD="width: 220"]DK[/TD]
[TD="width: 50, align: right"]23.65[/TD]

[TD="width: 40, align: center"]19[/TD]
[TD="width: 220"]Scottish[/TD]
[TD="width: 50, align: right"]24.13[/TD]

[TD="width: 40, align: center"]20[/TD]
[TD="width: 220"]NO[/TD]
[TD="width: 50, align: right"]25.24[/TD]

Mixed Mode Population Sharing:

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[TD="width: 20, align: center"] # [/TD]
[TD="width: 15"] [/TD]
[TD="colspan: 3"] Primary Population (source) [/TD]
[TD="colspan: 3"] Secondary Population (source) [/TD]
[TD="align: right"] Distance [/TD]

[TD="width: 20, align: center"]1[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]58%[/TD]
[TD="width: 200"] FR[/TD]

[TD="width: 30, align: right"]42%[/TD]
[TD="width: 200"] GR[/TD]

[TD="width: 50, align: right"]3.35[/TD]

[TD="width: 20, align: center"]2[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]85.3%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]14.7%[/TD]
[TD="width: 200"] Erzya[/TD]

[TD="width: 50, align: right"]3.41[/TD]

[TD="width: 20, align: center"]3[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]84.2%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]15.8%[/TD]
[TD="width: 200"] East_Russian[/TD]

[TD="width: 50, align: right"]3.44[/TD]

[TD="width: 20, align: center"]4[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]85.4%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]14.6%[/TD]
[TD="width: 200"] North_Russian[/TD]

[TD="width: 50, align: right"]3.47[/TD]

[TD="width: 20, align: center"]5[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]86.2%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]13.8%[/TD]
[TD="width: 200"] Udmurt[/TD]

[TD="width: 50, align: right"]3.65[/TD]

[TD="width: 20, align: center"]6[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]83.7%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]16.3%[/TD]
[TD="width: 200"] West_Russian[/TD]

[TD="width: 50, align: right"]3.74[/TD]

[TD="width: 20, align: center"]7[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]71.8%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]28.2%[/TD]
[TD="width: 200"] AT[/TD]

[TD="width: 50, align: right"]3.78[/TD]

[TD="width: 20, align: center"]8[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]84.1%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]15.9%[/TD]
[TD="width: 200"] South_Finnish[/TD]

[TD="width: 50, align: right"]3.83[/TD]

[TD="width: 20, align: center"]9[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]85.2%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]14.8%[/TD]
[TD="width: 200"] East_Finnish[/TD]

[TD="width: 50, align: right"]3.85[/TD]

[TD="width: 20, align: center"]10[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]74.4%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]25.6%[/TD]
[TD="width: 200"] HU[/TD]

[TD="width: 50, align: right"]3.85[/TD]

[TD="width: 20, align: center"]11[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]92.8%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]7.2%[/TD]
[TD="width: 200"] Udmurt[/TD]

[TD="width: 50, align: right"]3.88[/TD]

[TD="width: 20, align: center"]12[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]93%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]7%[/TD]
[TD="width: 200"] Komi[/TD]

[TD="width: 50, align: right"]3.91[/TD]

[TD="width: 20, align: center"]13[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]93.2%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]6.8%[/TD]
[TD="width: 200"] Lezgin[/TD]

[TD="width: 50, align: right"]3.96[/TD]

[TD="width: 20, align: center"]14[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]82.1%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]17.9%[/TD]
[TD="width: 200"] Serbian[/TD]

[TD="width: 50, align: right"]3.97[/TD]

[TD="width: 20, align: center"]15[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]84%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]16%[/TD]
[TD="width: 200"] Ukrainian-Russian[/TD]

[TD="width: 50, align: right"]3.97[/TD]

[TD="width: 20, align: center"]16[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]81.7%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]18.3%[/TD]
[TD="width: 200"] RO[/TD]

[TD="width: 50, align: right"]4.09[/TD]

[TD="width: 20, align: center"]17[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]93.2%[/TD]
[TD="width: 200"] North_Italian[/TD]

[TD="width: 30, align: right"]6.8%[/TD]
[TD="width: 200"] IR[/TD]

[TD="width: 50, align: right"]4.09[/TD]

[TD="width: 20, align: center"]18[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]86.2%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]13.8%[/TD]
[TD="width: 200"] Northwest_Russian[/TD]

[TD="width: 50, align: right"]4.11[/TD]

[TD="width: 20, align: center"]19[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]83.5%[/TD]
[TD="width: 200"] Tuscan[/TD]

[TD="width: 30, align: right"]16.5%[/TD]
[TD="width: 200"] PL[/TD]

[TD="width: 50, align: right"]4.11[/TD]

[TD="width: 20, align: center"]20[/TD]
[TD="width: 15"] [/TD]
[TD="width: 30, align: right"]55.2%[/TD]
[TD="width: 200"] FR[/TD]

[TD="width: 30, align: right"]44.8%[/TD]
[TD="width: 200"] South_Italian_&_Sicilian[/TD]

[TD="width: 50, align: right"]4.11[/TD]
 
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